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1

Dynamic polarizability calculation with fragment molecular orbital scheme

Yuji Mochizuki, Takeshi Ishikawa, Kiyoshi Tanaka, Hiroaki Tokiwa, Tatsuya Nakano, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2006

Language:

english

File:

PDF, 153 KB

english, 2006

2

Counterpoise-corrected interaction energy analysis based on the fragment molecular orbital scheme

Yoshio Okiyama, Kaori Fukuzawa, Haruka Yamada, Yuji Mochizuki, Tatsuya Nakano, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2011

Language:

english

File:

PDF, 493 KB

english, 2011

3

Molecular mechanics and all-electron fragment molecular orbital calculations on mutated polyglutamine peptides

Bryan M.B. Van Schouwen, Miki Nakano, Hirofumi Watanabe, Shigenori Tanaka, Heather L. Gordon, Stuart M. Rothstein

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

2010

Language:

english

File:

PDF, 800 KB

english, 2010

4

Incorporation of solvation effects into the fragment molecular orbital calculations with the Poisson–Boltzmann equation

Hirofumi Watanabe, Yoshio Okiyama, Tatsuya Nakano, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2010

Language:

english

File:

PDF, 233 KB

english, 2010

5

The assessment of weathering stages in granites using an EC/pH meter

Anestoria Shalkowski, Yoshinori Kodama, Shigenori Nakano

Journal:

Year:

2009

Language:

english

File:

PDF, 893 KB

english, 2009

6

In-situ observation of structural change in MWCNTs under high-pressure H2 gas atmosphere

Nakayama, Atsuko, Numao, Shigenori, Nakano, Satoshi, Bandow, Shunji, Iijima, Sumio

Journal:

Diamond and Related Materials

Year:

2008

Language:

english

File:

PDF, 610 KB

english, 2008

7

Brazilian Propolis Suppresses Angiogenesis by Inducing Apoptosis in Tube-Forming Endothelial Cells through Inactivation of Survival Signal ERK1/2

Kunimasa, Kazuhiro, Ahn, Mok-Ryeon, Kobayashi, Tomomi, Eguchi, Ryoji, Kumazawa, Shigenori, Fujimori, Yoshihiro, Nakano, Takashi, Nakayama, Tsutomu, Kaji, Kazuhiko, Ohta, Toshiro

Journal:

Evidence-based Complementary and Alternative Medicine

Year:

2011

Language:

english

File:

PDF, 846 KB

english, 2011

8

Fragment Molecular Orbital Calculations with Implicit Solvent Based on the Poisson–Boltzmann Equation: Implementation and DNA Study

Okiyama, Yoshio, Nakano, Tatsuya, Watanabe, Chiduru, Fukuzawa, Kaori, Tanaka, Shigenori

Journal:

Journal of Physical Chemistry B

Year:

2018

Language:

english

File:

PDF, 12.09 MB

english, 2018

9

Intra- and intermolecular interactions between cyclic-AMP receptor protein and DNA: Ab initio fragment molecular orbital study

Kaori Fukuzawa, Yuto Komeiji, Yuji Mochizuki, Akifumi Kato, Tatsuya Nakano, Shigenori Tanaka

Journal:

Journal of Computational Chemistry

Year:

2006

Language:

english

File:

PDF, 660 KB

english, 2006

10

Intra- and intermolecular interactions between cyclic-AMP receptor protein and DNA: Ab initio fragment molecular orbital study

Kaori Fukuzawa, Yuto Komeiji, Yuji Mochizuki, Akifumi Kato, Tatsuya Nakano, Shigenori Tanaka

Journal:

Journal of Computational Chemistry

Year:

2007

Language:

english

File:

PDF, 136 KB

english, 2007

11

Sequential Injection Photometric Determination of Molybdenum Using Organic Wetting Film Extraction

Shigenori Nakano, Yongyi Luo, David Holman, Jaromir Ruzicka, Gary D. Christian

Journal:

Microchemical Journal

Year:

1997

Language:

english

File:

PDF, 89 KB

english, 1997

12

Flow-injection analysis of trace elements by use of catalytic reactions

Takuji Kawashima, Shigenori Nakano

Journal:

Analytica Chimica Acta

Year:

1992

Language:

english

File:

PDF, 1.36 MB

english, 1992

13

Flow-injection determination of subnanogram amounts of manganese by catalysis of the oxidative coupling of N,N-dimethyl-p-phenylenediamine with m-phenylenediamine

Shigenori Nakano, Masahiro Nozawa, Maki Yanagawa, Takuji Kawashima

Journal:

Analytica Chimica Acta

Year:

1992

Language:

english

File:

PDF, 573 KB

english, 1992

14

Three-dimensional reconstruction of echocardiograms based on orthogonal sections

Shinichi Tamura, Shigenori Nakano, Masayuki Matsumoto, Takashi Shimazu, Makoto Fujiwara, Taizo Matsuyama, Peter Hanrath

Journal:

Pattern Recognition

Year:

1985

Language:

english

File:

PDF, 3.30 MB

english, 1985

15

Fabrication and hard X-ray photoemission analysis of photocathodes with sharp solar-blind sensitivity using AlGaN films grown on Si substrates

Masatomo Sumiya, Yutaro Kamo, Naoki. Ohashi, Masaki Takeguchi, Yoon-Uk Heo, Hideki Yoshikawa, Shigenori Ueda, Keisuke Kobayashi, Tokuaki Nihashi, Minoru Hagino, Takayuki Nakano, Shunro Fuke

Journal:

Applied Surface Science

Year:

2010

Language:

english

File:

PDF, 318 KB

english, 2010

16

Visualization analysis of inter-fragment interaction energies of CRP–cAMP–DNA complex based on the fragment molecular orbital method

Ikuo Kurisaki, Kaori Fukuzawa, Yuto Komeiji, Yuji Mochizuki, Tatsuya Nakano, Janine Imada, Aneta Chmielewski, Stuart M. Rothstein, Hirofumi Watanabe, Shigenori Tanaka

Journal:

Biophysical Chemistry

Year:

2007

Language:

english

File:

PDF, 1.98 MB

english, 2007

17

Molecular dynamics simulation study on the structural stabilities of polyglutamine peptides

Hajime Ogawa, Miki Nakano, Hirofumi Watanabe, E.B. Starikov, Stuart M. Rothstein, Shigenori Tanaka

Journal:

Computational Biology and Chemistry

Year:

2008

Language:

english

File:

PDF, 1.36 MB

english, 2008

18

A configuration analysis for fragment interaction

Yuji Mochizuki, Kaori Fukuzawa, Akifumi Kato, Shigenori Tanaka, Kazuo Kitaura, Tatsuya Nakano

Journal:

Chemical Physics Letters

Year:

2005

Language:

english

File:

PDF, 638 KB

english, 2005

19

Fragment molecular orbital calculations on large scale systems containing heavy metal atom

Takeshi Ishikawa, Yuji Mochizuki, Tatsuya Nakano, Shinji Amari, Hirotoshi Mori, Hiroaki Honda, Takatoshi Fujita, Hiroaki Tokiwa, Shigenori Tanaka, Yuto Komeiji, Kaori Fukuzawa, Kiyoshi Tanaka, Eisaku

Journal:

Chemical Physics Letters

Year:

2006

Language:

english

File:

PDF, 594 KB

english, 2006

20

Application of fragment molecular orbital scheme to silicon-containing systems

Takeshi Ishikawa, Yuji Mochizuki, Kenji Imamura, Tatsuya Nakano, Hirotoshi Mori, Hiroaki Tokiwa, Kiyoshi Tanaka, Eisaku Miyoshi, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2006

Language:

english

File:

PDF, 147 KB

english, 2006

21

Fragment molecular orbital calculations on red fluorescent protein (DsRed)

Yuji Mochizuki, Tatsuya Nakano, Shinji Amari, Takeshi Ishikawa, Kiyoshi Tanaka, Minoru Sakurai, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2007

Language:

english

File:

PDF, 882 KB

english, 2007

22

Application of the fragment molecular orbital method for determination of atomic charges on polypeptides

Yoshio Okiyama, Hirofumi Watanabe, Kaori Fukuzawa, Tatsuya Nakano, Yuji Mochizuki, Takeshi Ishikawa, Shigenori Tanaka, Kuniyoshi Ebina

Journal:

Chemical Physics Letters

Year:

2007

Language:

english

File:

PDF, 2.22 MB

english, 2007

23

Large scale FMO-MP2 calculations on a massively parallel-vector computer

Yuji Mochizuki, Katsumi Yamashita, Tadashi Murase, Tatsuya Nakano, Kaori Fukuzawa, Kazutomo Takematsu, Hirofumi Watanabe, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2008

Language:

english

File:

PDF, 936 KB

english, 2008

24

An application of fragment interaction analysis based on local MP2

Takeshi Ishikawa, Yuji Mochizuki, Shinji Amari, Tatsuya Nakano, Shigenori Tanaka, Kiyoshi Tanaka

Journal:

Chemical Physics Letters

Year:

2008

Language:

english

File:

PDF, 406 KB

english, 2008

25

Application of the fragment molecular orbital method for determination of atomic charges on polypeptides. II. Towards an improvement of force fields used for classical molecular dynamics simulations

Yoshio Okiyama, Hirofumi Watanabe, Kaori Fukuzawa, Tatsuya Nakano, Yuji Mochizuki, Takeshi Ishikawa, Kuniyoshi Ebina, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2009

Language:

english

File:

PDF, 2.03 MB

english, 2009

26

Accuracy of fragmentation in ab initio calculations of hydrated sodium cation

Takatoshi Fujita, Kaori Fukuzawa, Yuji Mochizuki, Tatsuya Nakano, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2009

Language:

english

File:

PDF, 532 KB

english, 2009

27

Large-scale FMO-MP3 calculations on the surface proteins of influenza virus, hemagglutinin (HA) and neuraminidase (NA)

Yuji Mochizuki, Katsumi Yamashita, Kaori Fukuzawa, Kazutomo Takematsu, Hirofumi Watanabe, Naoki Taguchi, Yoshio Okiyama, Misako Tsuboi, Tatsuya Nakano, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2010

Language:

english

File:

PDF, 1.02 MB

english, 2010

28

Determination of lead by stripping voltammetry with a disposable cartridge for quality control of municipal solid waste molten slag

Hideyuki Mongi, Akiko Kida, Natsuyo Uchida, Koichiro Iwasa, Shigenori Nakano

Journal:

Microchemical Journal

Year:

2011

Language:

english

File:

PDF, 532 KB

english, 2011

29

Fragment molecular orbital (FMO) study on stabilization mechanism of neuro-oncological ventral antigen (NOVA)–RNA complex system

Ikuo Kurisaki, Kaori Fukuzawa, Tatsuya Nakano, Yuji Mochizuki, Hirofumi Watanabe, Shigenori Tanaka

Journal:

Journal of Molecular Structure: THEOCHEM

Year:

2010

Language:

english

File:

PDF, 1.26 MB

english, 2010

30

Catalytic determination of submicrogram amounts of selenium(iv) by means of the ox1dative coupling reaction of phenylhydrazine-p-sulfonic acid with 1-naphthylamine

Takuji Kawashima, Shigenori Nakano, Motoharu Tanaka

Journal:

Analytica Chimica Acta

Year:

1970

Language:

english

File:

PDF, 343 KB

english, 1970

31

A new catalytic determination of ultratrace amounts of iron with p-anisidine and n, n-dimethylaniline

Takuji Kawashima, Yoshihiro Kozuma, Shigenori Nakano

Journal:

Analytica Chimica Acta

Year:

1979

Language:

english

File:

PDF, 425 KB

english, 1979

32

Flow-injection determination of chromium(III) by its catalysis on the oxidative coupling of 3-methyl-2-benzothiazolinone hydrazone with N-ethyl-N-(2-hydroxy-3-sulfopropyl)-3-methoxyaniline

Mayumi Kaneko, Makoto Kurihara, Shigenori Nakano, Takuji Kawashima

Journal:

Analytica Chimica Acta

Year:

2002

Language:

english

File:

PDF, 175 KB

english, 2002

33

Flow-injection/standard subtraction method for the determination of iron(III) based on its catalytic effect and inhibition of EDTA

Tsuyako Watanabe, Norio Teshima, Shigenori Nakano, Takuji Kawashima

Journal:

Analytica Chimica Acta

Year:

1998

Language:

english

File:

PDF, 102 KB

english, 1998

34

Mutual displacement interactions in the binding of two drugs to human serum albumin by frontal affinity chromatography

Naomi I. Nakano, Yoshimitsu Shimamori, Shigenori Yamaguchi

Journal:

Journal of Chromatography A

Year:

1980

Language:

english

File:

PDF, 764 KB

english, 1980

35

Binding capacities of human serum albumin monomer and dimer by continuous frontal affinity chromatography

Naomi I. Nakano, Yoshimitsu Shimamori, Shigenori Yamaguchi

Journal:

Journal of Chromatography A

Year:

1982

Language:

english

File:

PDF, 606 KB

english, 1982

36

Catalytic reactions as applied to trace analysis

Takuji Kawashima, Shigenori Nakano, Masaaki Tabata, Motoharu Tanaka

Journal:

TrAC Trends in Analytical Chemistry

Year:

1997

Language:

english

File:

PDF, 876 KB

english, 1997

37

Endotoxin contamination in fetal bovine serum and its influence on tumor necrosis factor production by macrophage-like cells J774.1 cultured in the presence of the serum

Teruo Kirikae, Hiroshi Tamura, Mami Hashizume, Fumiko Kirikae, Yayoi Uemura, Shigenori Tanaka, Takashi Yokochi, Masayasu Nakano

Journal:

International Journal of Immunopharmacology

Year:

1997

Language:

english

File:

PDF, 619 KB

english, 1997

38

Complicating risk factors for pyelonephritis after extracorporeal shock wave lithotripsy

Kimio Fujita, Takuji Mizuno, Tomomi Ushiyama, Kazuo Suzuki, Shinsuke Hadano, Shigenori Satoh, Tomoyuki Kambayashi, Soichi Mugiya, Masaru Nakano

Journal:

International Journal of Urology

Year:

2000

Language:

english

File:

PDF, 77 KB

english, 2000

39

Development of a packaging material using non-bleed-type antistatic ionomer

Nobuyuki Maki, Shigenori Nakano, Haruo Sasaki

Journal:

Packaging Technology and Science

Year:

2004

Language:

english

File:

PDF, 106 KB

english, 2004

40

Catalytic determination of nanogram amounts of Mn(II) by the aerial oxidative coupling reaction of 3-methyl-2-benzothiazolinone hydrazone with N,N-dimethylaniline

Shigenori Nakano, Atsushi Ohta, Takuji Kawashima

Journal:

Microchimica Acta

Year:

1985

Language:

english

File:

PDF, 505 KB

english, 1985

41

Catalytic determination of ultratrace amounts of Cu(II) by the oxidative coupling reaction of 3-methyl-2-benzothiazolinone hydrazone with N,N-dimethylaniline

Shigenori Nakano, Hiroyuki Ihara, Masaya Tanaka, Takuji Kawashima

Journal:

Microchimica Acta

Year:

1985

Language:

english

File:

PDF, 499 KB

english, 1985

42

Catalytic determination of nanogram amounts of FE(II, III) by the oxidative coupling reaction of N-pheniyl-p-phenylenediamine with N,N-Dimethylaniline

Shigenori Nakano, Masao Odzu, Masaya Tanaka, Takuji Kawashima

Journal:

Microchimica Acta

Year:

1983

Language:

english

File:

PDF, 366 KB

english, 1983

43

Catalytic determination of nanogram amounts of Cu(II) by the oxidative coupling reaction of N-phenyl-p- phenylenediamine with N,N-dimethylaniline

Shigenori Nakano, Masaya Tanaka, Masanori Fushihara, Takuji Kawashima

Journal:

Microchimica Acta

Year:

1983

Language:

english

File:

PDF, 336 KB

english, 1983

44

Fragment interaction analysis based on local MP2

Takeshi Ishikawa, Yuji Mochizuki, Shinji Amari, Tatsuya Nakano, Hiroaki Tokiwa, Shigenori Tanaka, Kiyoshi Tanaka

Journal:

Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)

Year:

2007

Language:

english

File:

PDF, 382 KB

english, 2007

45

Higher-order correlated calculations based on fragment molecular orbital scheme

Yuji Mochizuki, Katsumi Yamashita, Tatsuya Nakano, Yoshio Okiyama, Kaori Fukuzawa, Naoki Taguchi, Shigenori Tanaka

Journal:

Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)

Year:

2011

Language:

english

File:

PDF, 504 KB

english, 2011

46

Antigen–antibody interactions of influenza virus hemagglutinin revealed by the fragment molecular orbital calculation

Akio Yoshioka, Kazutomo Takematsu, Ikuo Kurisaki, Kaori Fukuzawa, Yuji Mochizuki, Tatsuya Nakano, Eri Nobusawa, Katsuhisa Nakajima, Shigenori Tanaka

Journal:

Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)

Year:

2011

Language:

english

File:

PDF, 424 KB

english, 2011

47

Spectrophotometric determination of vanadium(IV, V) in chloride-rich samples by its catalytic effect on the oxidative coupling ofN,N-diphenylhydrazine with chromotropic acid

Shigenori Nakano, Yuko Matumoto, Yumi Fukumoto, Mikio Hayashi

Journal:

Microchimica Acta

Year:

2009

Language:

english

File:

PDF, 224 KB

english, 2009

48

Flow injection determination of trace amounts of copper based on its catalytic effect on the oxidation of 3, 3′, 5, 5′-tetramethylbenzidine by cumene hydroperoxide

Yuta Sekine, Isao Shitanda, Masayuki Itagaki, Kunihiro Watanabe, Shigenori Nakano, Takuji Kawashima

Journal:

Microchimica Acta

Year:

2010

Language:

english

File:

PDF, 165 KB

english, 2010

49

Mutation effects on structural stability of polyglutamine peptides by molecular dynamics simulation

Miki Nakano, Hirofumi Watanabe, E.B. Starikov, Stuart M. Rothstein, Shigenori Tanaka

Journal:

Interdisciplinary Sciences: Computational Life Sciences

Year:

2009

Language:

english

File:

PDF, 543 KB

english, 2009

50

Acceleration of fragment molecular orbital calculations with Cholesky decomposition approach

Yoshio Okiyama, Tatsuya Nakano, Katsumi Yamashita, Yuji Mochizuki, Naoki Taguchi, Shigenori Tanaka

Journal:

Chemical Physics Letters

Year:

2010

Language:

english

File:

PDF, 322 KB

english, 2010

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